Analysis

Job: {$hit.vcode}

Overview

Job information

  • Description: {$hit.description}
  • Create time: {$hit.ctime}
  • Validated editing sites: {$cd.sites}
  • Sites distribute on: {$cd.genes} genes
  • ADAR1 expression: {$hit.adar1}
    ADAR1 (FPKM) Editing sites Source Type
    {$as.adar1} {$as.editingsites} {$as.source} Normal tissue
  • ADAR2 expression: {$hit.adar2}
    ADAR2 (FPKM) Editing sites Source Type
    {$as.adar2} {$as.editingsites} {$as.source} Normal tissue

Editing effects

  • Caused by 3' UTR editing: {$hit.utr}
  • Caused by miRNA editing: {$hit.mir}
  • Caused by Splicing sites or branch sites editing: {$hit.splicing}
  • Caused by coding exon editing: {$hit.mis}

Gene Regulation

These genes will be down regulated by miRNA:(Enrichment analysis)

{$mio.reg}

These genes will not be regulated by miRNA:(Enrichment analysis)

{$mio.rel}

Discover

Gene(Transcript) Position Type Raw score Edited Score Variation(%) #Intron
{$hit.gene}({$hit.transcript}) {$hit.pos} {$hit.type|translator4Splicing} {$hit.raw_score} {$hit.new_score} {$hit.variation} {$hit.order}

Gene(Transcript) Chromosome Position Relative position Wild type Mutant
{$hit.gene}({$hit.transcript}) {$hit.chromosome} {$hit.position} {$hit.relpos} {$hit.fr} {$hit.to}